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Predicting protein electrostatics with protein language models

Top story 3 in the issue of 25 October 2026, in 32 AI Biotechnology.

Original source

Predicting protein electrostatics with protein language models

KaML-ESM models predict residue pKa values from sequence alone with errors near 0.5 units, then apply them across the human proteome to spot functional sites.

Evidence

Evidence: Peer-reviewed (evidence step 5 of 6)

Published after review by independent experts.

The story in three lines

Key finding
Sequence-only models predicted pKa with about 0.5-unit error for six residue types in native proteins, but did worse on buried engineered mutations.
Significance
Shows evolutionary sequence data also carry electrostatic information useful for enzyme and drug design.
Takeaway
A free tool for protein engineering, with clear limits on unusual designed proteins.

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